Hardware and software for accessible, extensible, and scalable bioreactors. Built on Raspberry Pi.
An open-source Raspberry-Pi based photobioreactor for cultivating and assessing physiology (photosynthesis & productivity) in microscopic algae.
Bio Reactor Design (BiRD): a toolbox to simulate and analyze different designs of bioreactors in OpenFOAM
Lists of bioreactor-related useful information.
Raspberry Pi communicates with 4 Arduinos over serial USB connection to regulate flow through 24 peristaltic pumps for use in a bioreactor.
Python package for processing of DASware raw data exports.
Arduino code for pH, temperature monitoring, data logger, turbiostat, control LED for mimicking sun pattern. Python script for the simulation of microalgae growth with real solar profiles.
Rocking wave bioreactor open-source software repository (Basilisk C), supporting collaborative work with the Harris Lab at Brown University. Complements the publication available at https://doi.org/10.1016/j.ijmultiphaseflow.2025.105375 and the preprint available at https://arxiv.org/abs/2504.05421.
A hybrid modeling framework combining neural networks with physics-based constraints for bioreactor process optimization and control.
Kinetic model and optimization of co-culture bioreactor with in-situ product removal
Software for monitoring metagenomes using nanopore sequencing reads
A Command-Line Interface for the eVOLVER Continuous Culture Framework
The Bioreactor Project for Engineering Challenges at UCL with students from Electronic and Electrical Engineering (EEE)
Composable, modular, and extensible bioreactor design.
Microalgal growth simulation for CO₂ capture estimation. Monod kinetics, Steele photoinhibition, and CTMI temperature modeling for Chlorella vulgaris under Surat, India's tropical climate.
The ultimate control system and sensor logger
Project Blue Green: Sustainable Algae Bioreactor (Under Development)
Fermentation analysis toolkit: growth kinetics, elemental mass balance, scale-up modeling and a digital twin — validated against literature datasets
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